Connectomics! Neural Structure Reconstruction from Fluorescence Imaging of Neural Activity


Course Project CS 365A

Karan Singh, Pankaj Gupta

Indian Institute of Technology, Kanpur.

Not so FAQs!

  1. What are you folks trying to accomplish?
    We are trying to figure out pairs of neurons are connected (through a directed edge) from the time series activity of the neurons.
  2. Why should I be excited about it?
  3. So, how do you do it?
    We look at what different measures of statistical causality and information-theoretic measures have to say about the problem.
    We also make a few intersting observation about biological neural networks.
  4. What's up with such a big title?
    The task is to predict the existence of edges; and the neural activity is measured through some abra-kadabra spell -- fluorescence imaging.
  5. Your work is boring as hell! I don't care!
    We are sorry. The title reads "Not so Frequently Asked Questions!" And, this isn't one.

Resources:

  • Proposal
  • Slides
  • Poster
  • Report
  • Code